RNA-Seq with EPIC-CoGe in 3 minutes

April 7, 2014 Leave a comment 3,835 Views

This video tutorial shows how to clean and map RNA-Seq data to any genome in CoGe. This includes generating BAM files, quantitating reads per position across a genome, and generating FPKM for genes. These data can be kept private and ...

Workshop – A Simple Bioinformatics Workflow for RNA-Seq Analysis and Distributed Genome Annotation

January 9, 2014 Leave a comment 5,030 Views

Plant and Animal Genomes XXII – Workshop Part of the workshop – DNA Subway: Genomics, DNA Barcoding, and RNA-Seq Made Easy for the Undergraduate Classroom Location – Town & Country Hotel – San Diego, CA Get a first look at ...

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RNA-Seq with EPIC-CoGe in 3 minutes

Workshop – A Simple Bioinformatics Workflow for RNA-Seq Analysis and Distributed Genome Annotation

Zero-preserving imputation of single-cell RNA-seq data

Featured RNA-Seq Job – Computational Scientist

Veranome Biosystems and Cold Spring Harbor Laboratory Enter Collaboration and Licensing Agreement to Develop Advanced In-Situ Sequencing Technologies

iDIRECT – disentangling direct from indirect relationships in association networks

small RNA sequencing suggests BPA exposure of the placenta could affect fetal brain development

A comprehensive comparison of supervised and unsupervised methods for cell type identification in single-cell RNA-seq

Using synthetic chromosome controls to evaluate the sequencing of difficult regions within the human genome