Single-cell RNA sequencing outlines the immune landscape of severe COVID-19

July 13, 2020 Leave a comment 2,606 Views

A new single-cell RNA sequencing analysis of more than 59,000 cells from three different patient cohorts provides a detailed look at patients' immune responses to severe cases of COVID-19. The results suggest that patients with severe COVID-19...

Octopus-toolkit – a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data

February 9, 2018 Leave a comment 4,680 Views

The Octopus-toolkit, a stand-alone application for retrieving and processing large sets of next-generation sequencing (NGS) data with a single step Octopus-toolkit is an automated set...

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Tag Archives: Korea Advanced Institute of Science and Technology

Single-cell RNA sequencing outlines the immune landscape of severe COVID-19

Octopus-toolkit – a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data

TGIRT sequencing reveals abundant non-microRNA-small RNAs in BLCA tumor samples

totRNAseq – high-throughput muscle fiber typing from RNA sequencing data

THRONE – a new approach for accurate prediction of human RNA N7-methylguanosine sites

Pan-cancer single-cell RNA-sequencing analysis reveals cancer cell states recur across tumor types

BoT-Net – a lightweight bag of tricks-based neural network for efficient LncRNA–miRNA interaction prediction

Unearthing novel fusions as therapeutic targets in solid tumors using targeted RNA sequencing

Kassandra – precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes