Single-cell RNA sequencing outlines the immune landscape of severe COVID-19

July 13, 2020 Leave a comment 2,288 Views

A new single-cell RNA sequencing analysis of more than 59,000 cells from three different patient cohorts provides a detailed look at patients' immune responses to severe cases of COVID-19. The results suggest that patients with severe COVID-19...

Octopus-toolkit – a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data

February 9, 2018 Leave a comment 4,442 Views

The Octopus-toolkit, a stand-alone application for retrieving and processing large sets of next-generation sequencing (NGS) data with a single step Octopus-toolkit is an automated set...

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Single-cell RNA sequencing outlines the immune landscape of severe COVID-19

Octopus-toolkit – a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data

SNuBar-ATAC – simple oligonucleotide-based multiplexing of single-cell chromatin accessibility

Single cell RNA sequencing based identification and profiling of Leishmania parasitized host cells

Direct RNA sequencing reveals SARS-CoV-2 m6A sites

Single-cell RNA sequencing identifies of early-stage lung cancer biomarkers from circulating blood

scRNA-seq – Introduction to single cell RNA-seq data analysis

m6A-seq2 – multiplexed profiling facilitates robust m6A quantification at site, gene and sample resolution

Scientists use m6A RNA sequencing to gain new understanding of how brain cells talk