EMSAR – estimation of transcript abundance from RNA-seq data by mappability-based segmentation and reclustering

September 17, 2015 Leave a comment 5,284 Views

RNA-seq has been widely used for genome-wide expression profiling. RNA-seq data typically consists of tens of millions of short sequenced reads from different transcripts. However, due to sequence similarity among genes and among isoforms, the source of a given read ...

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Tag Archives: mappability

EMSAR – estimation of transcript abundance from RNA-seq data by mappability-based segmentation and reclustering

RNA folding studies by tRNA structure-seq inside peptide-rich droplets reveal roles of modified nucleosides at the origin of life

GiRAFR – gRNA detection and annotation in single-cell CRISPR screens

RNA sequencing reaveals novel intracellular signaling mechanisms that promote melanoma growth

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capTEs – Cas9-assisted profiling transposable elements expression sequencing

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DISCERN – deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection