AStalavista – Analysis of Alternative Splicing Events in Custom Gene Datasets

January 16, 2015 1 Comment 7,715 Views

Alternative splicing (AS) is a eukaryotic principle to derive more than one RNA product from transcribed genes by removing distinct subsets of introns from a premature polymer. We know today that this process is highly regulated and makes up a ...

Methods to study splicing from high-throughput RNA sequencing data

February 20, 2014 Leave a comment 7,913 Views

The development of novel high-throughput sequencing (HTS) methods for RNA (RNA-Seq) has provided a very powerful mean to study splicing under multiple conditions at unprecedented depth. However, the complexity of the information to be analyzed has turned this into a ...

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AStalavista – Analysis of Alternative Splicing Events in Custom Gene Datasets

Methods to study splicing from high-throughput RNA sequencing data

Kassandra – precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes

RNA Sequencing identifies potential targets for treating a common type of chronic, non-healing wound

Kyoto scientists use mathematics to extract clear signals from single-cell RNA sequencing data

SMaSH – a scalable, general marker gene identification framework for single-cell RNA-sequencing

PlaqView 2.0 – A comprehensive web portal for cardiovascular single-cell genomics

Sample-multiplexing approaches for single-cell sequencing

Researchers use single-cell approaches and deep learning to map all stages of fruit fly embryo development