MetaCell – analysis of single-cell RNA-seq data using K-nn graph partitions

October 15, 2019 Leave a comment 5,007 Views

scRNA-seq profiles each represent a highly partial sample of mRNA molecules from a unique cell that can never be resampled, and robust analysis must...

Estimation of isoform expression in RNA-seq data using a hierarchical bayesian model

September 24, 2015 Leave a comment 3,269 Views

Estimation of gene or isoform expression is a fundamental step in many transcriptome analysis tasks, such as differential expression analysis, eQTL (or sQTL) studies, and biological network construction. RNA-seq technology enables us to monitor the expression on genome-wide scale at ...

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Tag Archives: Multinomial distribution

MetaCell – analysis of single-cell RNA-seq data using K-nn graph partitions

Estimation of isoform expression in RNA-seq data using a hierarchical bayesian model

dsRID – in silico identification of dsRNA regions using long-read RNA-seq data

FUN-PROSE – predicting the response of fungal genes

Unraveling the timeline of gene expression – a pseudotemporal trajectory analysis of single-cell RNA sequencing data

INVADEseq – cataloging bacterial diversity within tumor samples

RNA sequencing identifies genetic effects of traumatic brain injury using an artificial brain

Researchers develop new method to identify and remove background noise from single cell data

scReadSim – a single-cell RNA-seq and ATAC-seq read simulator