FlipFlop – Efficient RNA Isoform Identification and Quantification from RNA-Seq Data with Network Flows

May 14, 2014 Leave a comment 4,316 Views

Several state-of-the-art methods for isoform identification and quantification are based on l1-regularized regression, such as the Lasso. However, explicitly listing the-possibly exponentially-large set of candidate transcripts is intractable for genes with many exons. For this reason, existing approaches using the ...

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Tag Archives: Network Flows

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