RNA Sequencing Analysis Reveals HeLa Cell Contamination

September 8, 2014 Comments Off on RNA Sequencing Analysis Reveals HeLa Cell Contamination 7,881 Views

Nasopharyngeal carcinoma (NPC) cell lines are important model systems for analyzing the complex life cycle and pathogenesis of Epstein-Barr virus (EBV). Using an RNA-seq-based approach, researchers from Tulane University Health Sciences Center found HeLa cell contamination in several NPC cell ...

ARH-seq – identification of differential splicing in RNA-seq data

June 17, 2014 Leave a comment 5,928 Views

The computational prediction of alternative splicing from high-throughput sequencing data is inherently difficult and necessitates robust statistical measures because the differential splicing signal is overlaid by influencing factors such as gene expression differences and simultaneous expression of multiple isoforms amongst ...

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RNA Sequencing Analysis Reveals HeLa Cell Contamination

ARH-seq – identification of differential splicing in RNA-seq data

BoT-Net – a lightweight bag of tricks-based neural network for efficient LncRNA–miRNA interaction prediction

Unearthing novel fusions as therapeutic targets in solid tumors using targeted RNA sequencing

Kassandra – precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes

RNA Sequencing identifies potential targets for treating a common type of chronic, non-healing wound

Kyoto scientists use mathematics to extract clear signals from single-cell RNA sequencing data

SMaSH – a scalable, general marker gene identification framework for single-cell RNA-sequencing

PlaqView 2.0 – A comprehensive web portal for cardiovascular single-cell genomics