Enabling large-scale next-generation sequence assembly with Blacklight

October 9, 2014 Comments Off on Enabling large-scale next-generation sequence assembly with Blacklight 4,212 Views

A variety of extremely challenging biological sequence analyses were conducted on the XSEDE large shared memory resource Blacklight, using current bioinformatics tools and encompassing a wide range of scientific applications. These include genomic sequence assembly, very large metagenomic sequence assembly, ...

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Enabling large-scale next-generation sequence assembly with Blacklight

Kyoto scientists use mathematics to extract clear signals from single-cell RNA sequencing data

SMaSH – a scalable, general marker gene identification framework for single-cell RNA-sequencing

PlaqView 2.0 – A comprehensive web portal for cardiovascular single-cell genomics

Sample-multiplexing approaches for single-cell sequencing

Researchers use single-cell approaches and deep learning to map all stages of fruit fly embryo development

DeLTa-Seq – direct-lysate targeted RNA-Seq from crude tissue lysate

Tumor bulk-RNA seq identifies patients at high risk of progression in non-complete pathological responders from NADIM trial