RNA Structure Framework – automatic transcriptome-scale reconstruction of RNA structures from probing data

February 26, 2016 Leave a comment 3,937 Views

The rapidly increasing number of discovered non-coding RNAs makes the understanding of their structure a key feature toward a deeper comprehension of gene expression regulation. Various enzymatic- and chemically- based approaches have been recently developed to allow whole-genome studies of ...

Researchers use parallel analysis of mRNA structure (PARS), ribosome profiling and RNA sequencing (RNA-seq) to reveal that bacterial mRNA structure functions beyond information transfer

November 3, 2015 Leave a comment 5,791 Views

Messenger RNA acts as an informational molecule between DNA and translating ribosomes. Emerging evidence places mRNA in central cellular processes beyond its major function as informational entity. Although individual examples show that specific structural features of mRNA regulate translation and ...

RNA-Seq Blog Transcriptome Research & Industry News

Tag Archives: PARS

RNA Structure Framework – automatic transcriptome-scale reconstruction of RNA structures from probing data

Researchers use parallel analysis of mRNA structure (PARS), ribosome profiling and RNA sequencing (RNA-seq) to reveal that bacterial mRNA structure functions beyond information transfer

VAX-seq – mRNA vaccine quality analysis using RNA sequencing

Single-cell RNA-sequencing integration analysis revealed immune cell heterogeneity in five human autoimmune diseases

Tasmanian tiger RNA is first to be recovered, sequenced from an extinct animal

mitoSplitter – A mitochondrial variants-based method for efficient demultiplexing of pooled single-cell RNA-seq

“CHOOSE” – CRISPR-human organoids-scRNA-seq

SAHMI – denoising sparse microbial signals from single-cell sequencing of mammalian host tissues

Aging is associated with a systemic transcriptome imbalance