Quartz-Seq2 – a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads

March 13, 2018 Leave a comment 4,153 Views

High-throughput single-cell RNA-seq methods assign limited unique molecular identifier (UMI) counts as gene expression values to single cells from shallow sequence reads and detect limited gene counts. RIKEN institute researchers have developed a high-throughput single-cell RNA-seq method, Quartz-Seq2, to overcome ...

PAT-Seq – polyA-tagging and sequencing for tissue-specific expression analysis changes in an in vivo setting

January 30, 2015 Leave a comment 4,623 Views

Tissue-specific RNA plasticity broadly impacts the development, tissue identity and adaptability of all organisms, but changes in composition, expression levels and its impact on gene regulation in different somatic tissues are largely unknown. Now, researchers at Arizona State University have developed ...

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Tag Archives: polyA-tagging

Quartz-Seq2 – a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads

PAT-Seq – polyA-tagging and sequencing for tissue-specific expression analysis changes in an in vivo setting

IsoSeek – unbiased and UMI-informed sequencing of cell-free miRNAs at single-nucleotide resolution

Cell-level metadata are indispensable for documenting single-cell RNA sequencing datasets

Strategies for detecting and identifying biological signals amidst the variation commonly found in RNA sequencing data

Researchers use single-cell RNA sequencing to create critical new resource to boost coral reef conservation efforts

Sanity – bayesian inference of gene expression states from single-cell RNA-seq data

UT Dallas research advances emerging DNA sequencing technology

Post-doctoral position in computational biology of glioma