Step-by-step construction of gene co-expression networks from high-throughput RNA sequencing data

March 15, 2018 Leave a comment 12,935 Views

The rapid increase in the availability of transcriptomics data generated by RNA sequencing represents both a challenge and an opportunity for biologists without bioinformatics training. The challenge is handling, integrating, and interpreting these...

51% of non-canonical splice sites are not annotated in GENCODE

August 18, 2014 Comments Off on 51% of non-canonical splice sites are not annotated in GENCODE 4,918 Views

Scientists at the Pontifical Catholic University of Chile have uncovered the diversity of non-canonical splice sites at the human transcriptome using deep transcriptome profiling. They mapped a total of 3.7 billion human RNA-seq reads and developed a set of stringent ...

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Tag Archives: Pontifical Catholic University of Chile

Step-by-step construction of gene co-expression networks from high-throughput RNA sequencing data

51% of non-canonical splice sites are not annotated in GENCODE

First single-cell atlas of the human eye constructed

Representation learning of RNA velocity reveals robust cell transitions

A 3’-end capture sequencing method for high-throughput targeted gene expression profiling

Effects of Key RNA-sequencing Technical Elements on Toxicity Assessment using Three Biological Replicates

RNA-Scoop – interactive visualization of transcripts in single-cell transcriptomes

SCHNAPPs – Single Cell sHiNy APPlication(s)

CircAID-p-seq – a PCR-free library preparation for selective 3′ phospho-RNA sequencing