Step-by-step construction of gene co-expression networks from high-throughput RNA sequencing data

March 15, 2018 Leave a comment 13,851 Views

The rapid increase in the availability of transcriptomics data generated by RNA sequencing represents both a challenge and an opportunity for biologists without bioinformatics training. The challenge is handling, integrating, and interpreting these...

51% of non-canonical splice sites are not annotated in GENCODE

August 18, 2014 Comments Off on 51% of non-canonical splice sites are not annotated in GENCODE 5,194 Views

Scientists at the Pontifical Catholic University of Chile have uncovered the diversity of non-canonical splice sites at the human transcriptome using deep transcriptome profiling. They mapped a total of 3.7 billion human RNA-seq reads and developed a set of stringent ...

RNA-Seq Blog Transcriptome Research & Industry News

Tag Archives: Pontifical Catholic University of Chile

Step-by-step construction of gene co-expression networks from high-throughput RNA sequencing data

51% of non-canonical splice sites are not annotated in GENCODE

Researchers develop online portal to show how biases in RNA sequences affect gene expression

Transcriptional recording enables noninvasive measurement of the intestinal tract with potential for biomedical research and future biomedical diagnostic applications

ActiveSVM – single-cell mRNA-seq data analysis with a minimal number of genes

scRNA-Seq draws a a roadmap to future personalized medicine for heart defects that develop before birth

DestVI – identification of continuums of cell types in spatial transcriptomics data

TAS-Seq – terminator-assisted solid-phase cDNA amplification and sequencing for scRNA-seq

Post-doc position available – single-cell multi-omics analyses in a first-in-human gene therapy trial