TranscriptCoder – Proteomic validation of transcript isoforms, including those assembled from RNA-Seq data

May 14, 2015 Leave a comment 4,191 Views

Human proteome analysis now requires an understanding of protein isoforms. Researchers from the University of New South Wales explore how RNA-seq transcriptomics data, and proteomic analysis of the same sample, can identify protein isoforms. RNA-seq data from human mesenchymal (hMSC) ...

Roadmap to the epitranscriptome

December 11, 2014 Leave a comment 8,006 Views

The “RNA world” is not at all hypothetical but rather the biological world we live in (1). For RNA to function within a modern cellular milieu of proteins and DNA, numerous chemical modifications coevolved that help sculpt its interactions (2). ...

RNA-Seq Blog Transcriptome Research & Industry News

Tag Archives: proteomic

TranscriptCoder – Proteomic validation of transcript isoforms, including those assembled from RNA-Seq data

Roadmap to the epitranscriptome

Establishment of a hybridoma sequencing pipeline for sequencing of antibody variable regions

RNA-seq identifies stochastic RNA editing of synaptic genes in single neurons

NVIGEN pioneers breakthrough in high-resolution tissue RNA sequencing with magnetic nanoparticle capture

RNA folding studies by tRNA structure-seq inside peptide-rich droplets reveal roles of modified nucleosides at the origin of life

GiRAFR – gRNA detection and annotation in single-cell CRISPR screens

RNA sequencing reaveals novel intracellular signaling mechanisms that promote melanoma growth

AAV-Perturb-seq – adeno-associated virus (AAV)-mediated direct in vivo single-cell CRISPR screening