RVboost: RNA-Seq variants prioritization using a boosting method

September 2, 2014 Comments Off on RVboost: RNA-Seq variants prioritization using a boosting method 6,529 Views

RNA-Seq has become the method of choice to quantify genes and exons, discover novel transcripts, and detect fusion genes. However, reliable variant identification from RNA-Seq data remains challenging due to the complexities of the transcriptome, the challenges of accurately mapping ...

Consistent Errors in First Strand cDNA Due to Random Hexamer Mispriming

January 7, 2014 Leave a comment 5,114 Views

Priming of random hexamers in cDNA synthesis is known to show sequence bias, but in addition it has been suggested recently that mismatches in random hexamer priming could be a cause of mismatches between the original RNA fragment and observed ...

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Tag Archives: random hexamer

RVboost: RNA-Seq variants prioritization using a boosting method

Consistent Errors in First Strand cDNA Due to Random Hexamer Mispriming

Single cell RNA sequencing opens new avenues for eradicating leukaemia at its source

2passtools: two-pass alignment using machine-learning-filtered splice junctions increases the accuracy of intron detection in long-read RNA sequencing

scRNA-Seq reveals a new type of bone cell that may uncover therapeutic targets for a range of skeletal diseases

DEBKS – a tool to detect differentially expressed circular RNA

Single-cell RNA and protein expression in relation to cell cycle progression

Evaluating capture sequence performance for single-cell CRISPR activation experiments

Seven Bridges Selected by Pfizer to Support Data Management Solution for Single-Cell RNA Sequencing Data