RVboost: RNA-Seq variants prioritization using a boosting method

September 2, 2014 Comments Off on RVboost: RNA-Seq variants prioritization using a boosting method 7,020 Views

RNA-Seq has become the method of choice to quantify genes and exons, discover novel transcripts, and detect fusion genes. However, reliable variant identification from RNA-Seq data remains challenging due to the complexities of the transcriptome, the challenges of accurately mapping ...

Consistent Errors in First Strand cDNA Due to Random Hexamer Mispriming

January 7, 2014 Leave a comment 5,313 Views

Priming of random hexamers in cDNA synthesis is known to show sequence bias, but in addition it has been suggested recently that mismatches in random hexamer priming could be a cause of mismatches between the original RNA fragment and observed ...

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Tag Archives: random hexamer

RVboost: RNA-Seq variants prioritization using a boosting method

Consistent Errors in First Strand cDNA Due to Random Hexamer Mispriming

SNuBar-ATAC – simple oligonucleotide-based multiplexing of single-cell chromatin accessibility

Single cell RNA sequencing based identification and profiling of Leishmania parasitized host cells

Direct RNA sequencing reveals SARS-CoV-2 m6A sites

Single-cell RNA sequencing identifies of early-stage lung cancer biomarkers from circulating blood

scRNA-seq – Introduction to single cell RNA-seq data analysis

m6A-seq2 – multiplexed profiling facilitates robust m6A quantification at site, gene and sample resolution

Scientists use m6A RNA sequencing to gain new understanding of how brain cells talk