RVboost: RNA-Seq variants prioritization using a boosting method

September 2, 2014 Comments Off on RVboost: RNA-Seq variants prioritization using a boosting method 7,742 Views

RNA-Seq has become the method of choice to quantify genes and exons, discover novel transcripts, and detect fusion genes. However, reliable variant identification from RNA-Seq data remains challenging due to the complexities of the transcriptome, the challenges of accurately mapping ...

Consistent Errors in First Strand cDNA Due to Random Hexamer Mispriming

January 7, 2014 Leave a comment 5,652 Views

Priming of random hexamers in cDNA synthesis is known to show sequence bias, but in addition it has been suggested recently that mismatches in random hexamer priming could be a cause of mismatches between the original RNA fragment and observed ...

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Tag Archives: random hexamer

RVboost: RNA-Seq variants prioritization using a boosting method

Consistent Errors in First Strand cDNA Due to Random Hexamer Mispriming

MATQ_Drop – Multiple-Annealing-and-Tailing-based Quantitative scRNA-seq in Droplets

Featured RNA-Seq Job – Research Technician II – Single Cell RNA Sequencing

IMMUcan scDB – a fully integrated scRNA-seq database exclusively dedicated to human cancer

Correspondence analysis for dimension reduction, batch integration, and visualization of single-cell RNA-seq data

Mutant KRAS signaling drives alternative splicing in lung cancer cells

Single cell RNA-sequencing identifies cause for loss of smell in long COVID patients

ESPRESSO – robust discovery and quantification of transcript isoforms from error-prone long-read RNA-seq data