JHU Researchers Launch “recount,” the Largest Summarized Collection of Human RNA Sequencing Data to Date

February 2, 2017 Leave a comment 3,844 Views

Public sequencing data archives are growing by petabases — millions of billions of DNA letters — per year. But for typical researchers, using these data requires huge downloads and laborious re-analysis. Most researchers aren’t equipped for this, so valuable data ...

recount – A large-scale resource of analysis-ready RNA-seq expression data

August 16, 2016 1 Comment 6,097 Views

recount is a resource of processed and summarized expression data spanning nearly 60,000 human RNA-seq samples from the Sequence Read Archive (SRA). The associated recount Bioconductor package provides a convenient API for querying, downloading, and analyzing the data. Each processed ...

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JHU Researchers Launch “recount,” the Largest Summarized Collection of Human RNA Sequencing Data to Date

recount – A large-scale resource of analysis-ready RNA-seq expression data

Establishment of a hybridoma sequencing pipeline for sequencing of antibody variable regions

RNA-seq identifies stochastic RNA editing of synaptic genes in single neurons

NVIGEN pioneers breakthrough in high-resolution tissue RNA sequencing with magnetic nanoparticle capture

RNA folding studies by tRNA structure-seq inside peptide-rich droplets reveal roles of modified nucleosides at the origin of life

GiRAFR – gRNA detection and annotation in single-cell CRISPR screens

RNA sequencing reaveals novel intracellular signaling mechanisms that promote melanoma growth

AAV-Perturb-seq – adeno-associated virus (AAV)-mediated direct in vivo single-cell CRISPR screening