Methods for annotation and validation of circular RNAs from RNA-Seq data

January 17, 2019 Leave a comment 3,790 Views

Circular RNAs are an emerging class of transcript isoforms created by unique back splicing of exons to form a closed covalent circular structure. While...

Benchmarks of the read aligner segemehl in comparison with other state-of-the-art methods

March 19, 2014 Leave a comment 7,343 Views

Next generation sequencing has become an important tool in molecular biology. Various protocols to investigate genomic, transcriptomic, and epigenomic features across virtually all species and tissues have been devised. For most of these experiments, one of the first crucial steps ...

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Tag Archives: segemehl

Methods for annotation and validation of circular RNAs from RNA-Seq data

Benchmarks of the read aligner segemehl in comparison with other state-of-the-art methods

spSeudoMap – cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data

SoCube – an innovative end-to-end doublet detection algorithm for analyzing scRNA-seq data

Quantabio adds powerful bead booster chemistry to ultra-fast sparQ RNA-Seq HMR kit

SiT – spatial isoform transcriptomics

Analysis of single-cell rna-seq data

AllenDigger – spatial expression data visualization, spatial heterogeneity delineation, and single-cell registration based on the Allen Brain Atlas

New research identifies an inaccuracy in the single cell GENCODE gene model