Tag Archives: seqmonk

This video looks at how you can apply some of the tools within SeqMonk to the analysis of single-cell RNA-Seq data. It goes through QC, quantitation, variation analysis, clustering and PCA so show how these can all use useful in ...

This video shows a walk-through of a full 2-condition, 3-replicate RNA-Seq experiment, from loading the data, through QC, quantitation and differential expression analysis using both DESeq2 and SeqMonk’s own Intensity Difference filter. http://www.bioinformatics.babraham.ac.uk/projects/seqmonk/

by Simon Andrews at Babraham Bioinformatics This presentation is distributed under the creative commons Attribution-Non-Commercial-Share Alike 2.0 licence.