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Tag Archives: SSB

ChiloDB – a genomic and transcriptome database for an important rice insect pest Chilo suppressalis

July 10, 2014 Leave a comment 3,638 Views

ChiloDB is an integrated resource that will be of use to the rice stem borer research community. The rice striped stem borer (SSB), Chilo suppressalis Walker, is a major rice pest that causes severe yield losses in most rice-producing countries. ...

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Global RNA profiles show target selectivity and physiological effects of peptide-delivered antisense antibiotics
13 April 2021
CD24 gene inhibition and TIMP-4 gene upregulation by Imperata cylindrica's root extract prevents metastasis of CaSki cells via inhibiting PI3K/Akt/snail signaling pathway and blocking EMT
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Analysis of transcriptome difference between rapid-growing and slow-growing in Penaeus vannamei
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Early stem cell aging in the mature brain
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DNA methylome, transcriptome, and prostate cancer prevention by phenethyl isothiocyanate in TRAMP mice
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Viral diversity in Phytophthora cactorum population infecting strawberry
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What is RNA-Seq?

long RNAs are first converted into a library of cDNA fragments through either RNA fragmentation or DNA fragmentation. Sequencing adaptors (blue) are subsequently added to each cDNA fragment and a short sequence is obtained from each cDNA using high-throughput sequencing technology. The resulting sequence reads are aligned with the reference genome or transcriptome, and classified as three types: exonic reads, junction reads and poly(A) end-reads. These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009)


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    Single cell sequencing unravels molecular identity of rare renal cell types

    5 hours ago
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    SMIXnorm – fast and accurate RNA-Seq data normalization for FFPE Samples

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