Tag Archives: StringTie

RNA-Seq data analysis has become vital to understanding gene structure and expression patterns in transcriptomic studies. A typical reference genome guided RNA-Seq workflow...

High-throughput sequencing of mRNA (RNA-seq) has become the standard method for measuring and comparing the levels of gene expression in a wide variety of species and conditions. RNA-seq experiments generate very large, complex data sets that demand fast, accurate and ...

Methods used to sequence the transcriptome often produce more than 200 million short sequences. Researchers at Johns Hopkins University have developed StringTie, a computational method that applies a network flow algorithm originally developed in optimization theory, together with optional de ...