BioVLAB-MMIA-NGS – MicroRNA-mRNA Integrated Analysis using High Throughput Sequencing Data

October 9, 2014 Comments Off on BioVLAB-MMIA-NGS – MicroRNA-mRNA Integrated Analysis using High Throughput Sequencing Data 9,378 Views

It is now well established that microRNAs (miRNAs) play a critical role in regulating gene expression in a sequence specific manner and genome-wide efforts are underway to predict known and novel miRNA targets. However, the integrated miRNA-mRNA analysis remains a ...

Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing

January 22, 2014 Leave a comment 5,033 Views

In plants, microRNAs (miRNAs) are endogenous ~22 nt RNAs that play important regulatory roles in many aspects of plant biology, including metabolism, hormone response, epigenetic control of transposable elements, and stress response. Extensive studies of miRNAs have been performed in ...

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Tag Archives: target genes

BioVLAB-MMIA-NGS – MicroRNA-mRNA Integrated Analysis using High Throughput Sequencing Data

Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing

GiRAFR – gRNA detection and annotation in single-cell CRISPR screens

RNA sequencing reaveals novel intracellular signaling mechanisms that promote melanoma growth

AAV-Perturb-seq – adeno-associated virus (AAV)-mediated direct in vivo single-cell CRISPR screening

capTEs – Cas9-assisted profiling transposable elements expression sequencing

eSPET-seq – genome-wide probing of eukaryotic nascent RNA structure

DISCERN – deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection

Advancements in genome sequencing propel global RNA sequencing market growth to 2030