Tag Archives: workflow

Overview of an RNA Seq Workflow

rna-seq

This series is part of the Bioconductor Course held in Seattle from Oct 27 to Oct 28, 2014. In this video Martin Morgan, gives an overview of a typical RNA Seq workflow. Material for this video can be found at: ...

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Online games and remote experiments could reduce scientific fraud, cherry-picking

Carnegie Mellon and Stanford researchers advocate massive online laboratories PITTSBURGH—One way to combat the rising level of errors and fraud in life sciences research is through massive online laboratories, which use videogames to engage large numbers of non-professional investigators and ...

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RVboost: RNA-Seq variants prioritization using a boosting method

rna-seq

RNA-Seq has become the method of choice to quantify genes and exons, discover novel transcripts, and detect fusion genes. However, reliable variant identification from RNA-Seq data remains challenging due to the complexities of the transcriptome, the challenges of accurately mapping ...

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Success in RNA-Seq – Sample Prep and Workflow considerations

rna-seq

by Natalie McDonald, PhD RNA in the cell is comprised of a variety of populations, including traditional poly-adenylated messenger RNA (polyA RNA), non-adenlyated RNA, which may be coding or regulatory, ribosomal RNA (rRNA) and small and micro RNA.  The first ...

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